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Entry
CA00096                                                            

Classification
Carotenoid Name
Spirilloxanthin;
Rhodoviolascin
IUPAC name 1,1'-Dimethoxy-3,4,3',4'-tetradehydro-1,2,1',2'-tetrahydro-psi,psi-carotene
Formula
C42H60O2
Molecular Weight 
596.9 g/mol
Structure      Search similar carotenoids

Mol file
Carotenoid DB Fingerprints 
Biological functions/Properties 
  • Present in light harvesting complexes of photosynthetic bacteria Rhodospirillum ruburum (Ref.462).
  • Number of
    conjugated double bonds 
    13
    Number of
    conjugated multiple bonds 
    13
    Isomers 
  • Cis/trans isomer: CA00097
  • Constitutional isomer: CA00380, CA00622
  • InChI

    InChIKey

    Canonical SMILES

    XLogP
    13.180
    Hydrogen Bond donors
    (Lipinski's definition)
    0
    Hydrogen Bond Acceptors
    (Lipinski's definition)
    2
    LipinskiFailures
    2
    Complexity of molecule
    0.000
    Number of heavy atoms
    44
    TPSA
    (Topological Polar Surface Area) 
    18.460 Å2
    Reaction
  • Substrate: CR00250,  CR00251
  • Product: CR00128,  CR00327,  CR00335
  • Pathway
  • Pathway: CB000017,  CB000018,  CB000019,  CB000020,  CB000021,  CB000047,  CB000050,  CB000142
  • Major carotenoid information
    Major carotenoid in phototrophic purple nonsulfur bacteria Rhodoplanes species (Ref.708), Rhodospirillum rubrum (Ref.709), purple sulfur bacteria Thiocapsa roseopersicina, Thiocapsa pendens, Thiocapsa rosea, Thiocapsa litoralis (Ref.718) and Chromatium tepidum sp. nov. (Ref.730). Predominant carotenoid in purple-violet Thiocapsa strain 5811 (Ref.717).
    Minor carotenoid information

    Source organisms
    Thiocapsa sp. (Ref.360) - purple sulfur bacteria (Gammaproteobacteria - Chromatiaceae)
    Rubrivivax gelatinosus (Ref.546) - Betaproteobacteria: phototrophic purple nonsulfur bacteria (Betaproteobacteria - Unclassified Burkholderiales)
    Rhodopseudomonas palustris (Ref.344) - Alphaproteobacteria: phototrophic purple non-sulfur bacteria (Alphaproteobacteria - Bradyrhizobiaceae)
    Rhodobacter sphaeroides (Ref.343) - Alphaproteobacteria: phototrophic purple non-sulfur bacteria (Alphaproteobacteria - Rhodobacteraceae)
    Rhodospirillum rubrum (Ref.337) - Alphaproteobacteria: phototrophic purple non-sulfur bacteria (Alphaproteobacteria - Rhodospirillaceae)
    Erythrobacter longus (Ref.364) - Alphaproteobacteria: marine anoxygenic phototroph with BChl a (Alphaproteobacteria - Erythrobacteraceae)
    References
  • Ref.337: H.C. Malhotra, G. Britton, T.W. Goodwin, Phytochemistry, Volume 9, Issue 11, November 1970, Pages 2369–2375, "The mono- and dimethoxy-carotenoids of diphenylamine-inhibited cultures of rhodospirillum rubrum".
  • Ref.343: Niedzwiedzki, Dariusz M.; Dilbeck, Preston L.; Tang, Qun; Mothersole, David J.; Martin, Elizabeth C.; Bocian, David F.; Holten, Dewey; Hunter, C. Neil, Niedzwiedzki, Dariusz M.; Dilbeck, Preston L.; Tang, Qun; Mothersole, David J.; Martin, Elizabeth C.; Bocian, David F.; Holten, Dewey; Hunter, C. Neil, "Functional characteristics of spirilloxanthin and keto-bearing Analogues in light-harvesting LH2 complexes from Rhodobacter sphaeroides with a genetically modified carotenoid synthesis pathway".
  • Ref.344: Zhao, Chun-gui; Fu, Qiao-ming; Zhuo, Min-quan; Yang, Su-ping, Weishengwuxue Tongbao (2014), 41(7), 1448-1455., "The relative polarity and stability of each carotenoid of spirilloxanthin biosynthesis pathway by thin-layer chromatography (TLC)".
  • Ref.546: Sabine STEIGER, Chantal ASTIER and Gerhard SANDMANN, Biochem. J. (2000) 349, 635–640, "Substrate specificity of the expressed carotenoid 3,4-desaturase from Rubrivivax gelatinosus reveals the detailed reaction sequence to spheroidene and spirilloxanthin".
  • Ref.360: Pierre Caumette, Karin Schmidt, Hanno Biebl, Norbert Pfennig, Systematic and Applied Microbiology, Volume 6, Issue 2, September 1985, Pages 132–136, "Characterization of a Thiocapsa Strain Containing Okenone as Major Carotenoid".
  • Ref.364: S. Takaichi, K. Shimada, and J. Ishidsu, Arch Microbiol.(1990) 153:118-122, "Carotenoids from the aerobic photosynthetic bacterium, Erythrobacter longus: β-Carotene and its hydroxyl derivatives".
  • Ref.462: GERHART DREWS, MICROBIOLOGICAL REVIEWS, Mar. 1985, p. 59-70 , "Structure and Functional Organization of Light-Harvesting Complexes and Photochemical Reaction Centers in Membranes of Phototrophic Bacteria".
  • Ref.708: Takaichi S, Sasikala Ch, Ramana ChV, Okamura K, Hiraishi A., Curr Microbiol. 2012 Aug;65(2):150-5. doi: 10.1007/s00284-012-0139-y. Epub 2012 May 11., "Carotenoids in Rhodoplanes species: variation of compositions and substrate specificity of predicted carotenogenesis enzymes.".
  • Ref.709: Guo-Shu Wang, Hartmut Grammel, Khaled Abou-Aisha, Rudolf Sägesser, Robin Ghosh, Applied and Environmental Microbiology p.7205–7215, October 2012 Volume 78 Number 20, "High-Level Production of the Industrial Product Lycopene by the Photosynthetic Bacterium Rhodospirillum rubrum", DOI: 10.1128/AEM.00545-12.
  • Ref.718: Pierre Caumette, Remy Guyoneaud, Johannes F. Imhoff, Jorg Suiing and Vladimir Gorlenko, International Journal of Systematic and Evolutionary Microbiology (2004), 54, 1031–1036, "Thiocapsa marina sp. nov., a novel, okenonecontaining purple sulfur bacterium isolated from brackish coastal and marine environments".
  • Ref.730: MICHAEL T. MADIGAN, INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, Apr. 1986, p. 222-227, "Chromatium tepidum sp. nov. a Thermophilic Photosynthetic Bacterium of the Family Chromatiaceae".
  • Ref.717: Pierre Caumette, Karin Schmidt, Hanno Biebl, and Norbert Pfennig, Systematic and Applied Microbiology Volume 6, Issue 2, September 1985, Pages 132-136, "Characterization of a Thiocapsa Strain Containing Okenone as Major Carotenoid", https://doi.org/10.1016/S0723-2020(85)80045-X.
  • CAS
    34255-08-8
    Links to other DB
    KEGG COMPOUND: C15881
    KNApSAcK: C00022893
    LipidBank: VCA1040
    MassBank: CA000160
    ProCarDB: C1915

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