Carotenoids obi
All carotenoids     All organisms     All pathways     All reactions     Feedback
Carotenoids DB          Carotenoids DB: CA01135   
[   About  |   Help  |   Search carotenoid entry  |   Search organism entry  |   Search similar carotenoids  |   Predict biological activities of this carotenoid  |   Search possible biosynthetic routes of this carotenoid   ]
Entry
CA01135                                                            

Classification
Carotenoid Name
(9Z,3S,5R,6S)-5,6-Epoxy-3-hydroxy-12'-apo-β-caroten-12'-al;
(9Z,3S,5R,6S)-5,6-Epoxy-3-hydroxy-12'-apo-beta-caroten-12'-al;
C27 epoxy-apocarotenal
IUPAC name (9Z,3S,5R,6S)-5,6-Epoxy-3-hydroxy-12'-apo-beta-caroten-12'-al
Formula
C25H34O3
Molecular Weight 
382.522 g/mol
Structure      Search similar carotenoids

Mol file
Carotenoid DB Fingerprints 
Biological functions/Properties 
Number of
conjugated double bonds 
7 including one aldehyde (7 in total)
Number of
conjugated multiple bonds 
7 including one aldehyde (7 in total)
Isomers 
  • Cis/trans isomer: CA00841
  • InChI

    InChIKey

    Canonical SMILES

    XLogP
    5.019
    Hydrogen Bond donors
    (Lipinski's definition)
    1
    Hydrogen Bond Acceptors
    (Lipinski's definition)
    3
    LipinskiFailures
    1
    Complexity of molecule
    0.113
    Number of heavy atoms
    28
    TPSA
    (Topological Polar Surface Area) 
    49.830 Å2
    Reaction
  • Product: CR00047,  CR00048
  • Pathway
    Major carotenoid information

    Minor carotenoid information

    Source organisms
    Arabidopsis thaliana (Ref.551) - Land plant: thale-cress, a model organism (Streptophyta - Brassicaceae)
    References
  • Ref.551: Steven H. Schwartz, Xiaoqiong Qin, and Jan A. D. Zeevaart, THE JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 276, No. 27, Issue of July 6, pp. 25208–25211, 2001, "Characterization of a Novel Carotenoid Cleavage Dioxygenase from Plants".
  • CAS

    Links to other DB

       Searching other references with Google Scholar or searching the colour of this carotenoid by Google image search