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CarotenoidsDB:
Methylobacterium rhodinum -formerly Pseudomonas rhodos
carotenoids (Bacterial) reconstructed pathways in theory
   
(Alphaproteobacteria)
   
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Click here to see the carotenoid profile of Methylobacterium rhodinum -formerly Pseudomonas rhodos
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Pathway reconstructed carotenoids:
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CA00034 (4,4'-Diapocaroten-4'-al-4-oic acid)
CA00016 (4,4'-Diaplycopene-4,4'-dioic acid)
CA00014 (4,4'-Diapocarotenoic acid)
CA00018 (Diapolycopenedioic acid glucosyl ester)
CA00031 (4,4-(D-Glucopyranosyloxy)-4,4'-diapolycopene-4,4'-dioic acid diester)
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Pathway unconstructed carotenoids:
None
☀
Lycopene biosynthesis type:
Bacterial type (Diapolycopene)
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CA00001 (4,4'-Diapolycopene)
biosynthesis pathway
Path:
CA00008
(4,4'-Diapophytoene)
->
CA00007
(4,4'-Diapophytofluene)
->
CA00006
(4,4'-Diapo-ζ-carotene)
->
CA00002
(4,4'-Diaponeurosporene)
->
CA00001
(4,4'-Diapolycopene)
See:
CB000001
(Knwon path in bacterium: CA00008 -> CA00007 -> CA00006 -> CA00002 -> CA00001)
Necessary enzymes for those reactions in theory:
unknown (
CR00272
: CA00008 -> CA00007) --> unknown (
CR00116
: CA00007 -> CA00006) --> unknown (
CR00133
: CA00006 -> CA00002) --> CrtN(1.3.8.2) (
CR00137
: CA00002 -> CA00001)
☀
CA00034 (4,4'-Diapocaroten-4'-al-4-oic acid)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00010
(4,4'-Diapolycopen-4-al)
->
CA00013
(4,4'-Diapolycopenedial)
->
CA00034
(4,4'-Diapocaroten-4'-al-4-oic acid)
See:
CR00005
(CA00001 -> CA00010),
CR00008
(CA00010 -> CA00013),
CR00222
(CA00013 -> CA00034)
Necessary enzymes for those reactions in theory:
CrtOx (
CR00005
: CA00001 -> CA00010) --> CrtOx (
CR00008
: CA00010 -> CA00013) --> CrtOx (
CR00222
: CA00013 -> CA00034)
☀
CA00016 (4,4'-Diaplycopene-4,4'-dioic acid)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00010
(4,4'-Diapolycopen-4-al)
->
CA00013
(4,4'-Diapolycopenedial)
->
CA00016
(4,4'-Diaplycopene-4,4'-dioic acid)
See:
CR00005
(CA00001 -> CA00010),
CR00008
(CA00010 -> CA00013),
CR00224
(CA00013 -> CA00016)
Necessary enzymes for those reactions in theory:
CrtOx (
CR00005
: CA00001 -> CA00010) --> CrtOx (
CR00008
: CA00010 -> CA00013) --> Ald (
CR00224
: CA00013 -> CA00016)
☀
CA00014 (4,4'-Diapocarotenoic acid)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00014
(4,4'-Diapocarotenoic acid)
See:
Proposed reaction (CA00001 -> CA00014)
Necessary enzymes for those reactions in theory:
unknown (CA00001 -> CA00014)
☀
CA00018 (Diapolycopenedioic acid glucosyl ester)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00010
(4,4'-Diapolycopen-4-al)
->
CA00013
(4,4'-Diapolycopenedial)
->
CA00016
(4,4'-Diaplycopene-4,4'-dioic acid)
->
CA00018
(Diapolycopenedioic acid glucosyl ester)
See:
CR00005
(CA00001 -> CA00010),
CR00008
(CA00010 -> CA00013),
CR00224
(CA00013 -> CA00016), similar to
CB000003: CA00015 -> CA00022
(proposed reaction: CA00016 -> CA00018)
Necessary enzymes for those reactions in theory:
CrtOx (
CR00005
: CA00001 -> CA00010) --> CrtOx (
CR00008
: CA00010 -> CA00013) --> Ald (
CR00224
: CA00013 -> CA00016) --> unknown (CA00016 -> CA00018)
☀
CA00031 (4,4-(D-Glucopyranosyloxy)-4,4'-diapolycopene-4,4'-dioic acid diester)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00014
(4,4'-Diapocarotenoic acid)
->
CA00034
(4,4'-Diapocaroten-4'-al-4-oic acid)
->
CA00016
(4,4'-Diaplycopene-4,4'-dioic acid)
->
CA00018
(Diapolycopenedioic acid glucosyl ester)
->
CA00020
(Diapolycopenedioic acid diglucosyl ester)
->
CA00031
(4,4-(D-Glucopyranosyloxy)-4,4'-diapolycopene-4,4'-dioic acid diester)
See:
Proposed reaction (CA00001 -> CA00014), similar to
CR00008: CA00010 -> CA00013
(proposed reaction: CA00014 -> CA00034),
CR00227
(CA00034 -> CA00016), similar to
CB000003: CA00015 -> CA00022
(proposed reaction: CA00016 -> CA00018), Proposed reaction (CA00018 -> CA00020), Proposed reaction (CA00020 -> CA00031)
Necessary enzymes for those reactions in theory:
unknown (CA00001 -> CA00014) --> unknown (CA00014 -> CA00034) --> CrtOx ? (
CR00227
: CA00034 -> CA00016) --> unknown (CA00016 -> CA00018) --> unknown (CA00018 -> CA00020) --> unknown (CA00020 -> CA00031)
☀
CA00031 (4,4-(D-Glucopyranosyloxy)-4,4'-diapolycopene-4,4'-dioic acid diester)
biosynthesis pathway
Path:
CA00001
(4,4'-Diapolycopene)
->
CA00013
(4,4'-Diapolycopenedial)
->
CA00034
(4,4'-Diapocaroten-4'-al-4-oic acid)
->
CA00016
(4,4'-Diaplycopene-4,4'-dioic acid)
->
CA00018
(Diapolycopenedioic acid glucosyl ester)
->
CA00020
(Diapolycopenedioic acid diglucosyl ester)
->
CA00031
(4,4-(D-Glucopyranosyloxy)-4,4'-diapolycopene-4,4'-dioic acid diester)
See:
CB000001
(Knwon path in bacterium: CA00001 -> CA00013),
CR00222
(CA00013 -> CA00034),
CR00227
(CA00034 -> CA00016), similar to
CB000003: CA00015 -> CA00022
(proposed reaction: CA00016 -> CA00018), Proposed reaction (CA00018 -> CA00020), Proposed reaction (CA00020 -> CA00031)
Necessary enzymes for those reactions in theory:
CrtN2(1.14.99.44), CrtNb(1.14.99.44), CrtOx(1.14.99.44), CrtP (
CR00007
: CA00001 -> CA00013) --> CrtOx (
CR00222
: CA00013 -> CA00034) --> CrtOx ? (
CR00227
: CA00034 -> CA00016) --> unknown (CA00016 -> CA00018) --> unknown (CA00018 -> CA00020) --> unknown (CA00020 -> CA00031)
Since June 15th, 2015 by Junko Yabuzaki.