Carotenoids obi
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☀ Pathway reconstructed carotenoids:       Search similar carotenogenesis pathway constructing organisms  ]  
  1. CA01153 (Strigyl acetate)
  2. CA01152 (Strigol)
  3. CA01155 (Orobanchol)
  4. CA01156 (Sorgomol)
  5. CA01151 (5-Deoxystrigol)
  6. CA01154 (Sorgolactone)
  7. CA00863 (Blumenol C cellobioside)
  8. CA00862 (Blumenol C)
  9. CA00884 (Mycorradicin)
☀ Pathway unconstructed carotenoids: None
☀ Lycopene biosynthesis type: Bacterial type (Ref.690)


  ☀ CA00043 (Lycopene) biosynthesis pathway

   Path: CA00189 (Prephytoene pyrophosphate (diphosphate)) -> CA00060 (Phytoene) -> CA00058 ((all-E)-Phytofluene) -> CA00051 (ζ-Carotene) -> CA00047 (Neurosporene) -> CA00043 (Lycopene)

   See: CB000005 (Bacterial and fungal pathway: CA00189 -> CA00060 -> CA00058 -> CA00051 -> CA00047 -> CA00043)

   Necessary enzymes for those reactions in theory: CrtB(2.5.1.32), CitPsy(2.5.1.32), AtPSY(2.5.1.32) (CR00277: CA00189 -> CA00060) --> Crtlb(1.3.99.28), CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.99.29), Crtla(1.3.99.29) (CR00389: CA00060 -> CA00058) --> CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.5.5, 1.3.99.29), Crtla(1.3.99.29) (CR00115: CA00058 -> CA00051) --> PDS(1.3.5.5, 1.3.99.29), CitPDS1(1.3.5.5), BoPDS(1.3.5.5), CrtI(1.3.5.6, 1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00136: CA00051 -> CA00047) --> CrtI(1.3.5.6, 1.3.99.30, 1.3.99.31), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6), Crtlb(1.3.99.26) (CR00132: CA00047 -> CA00043)




  ☀ CA01153 (Strigyl acetate) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00311 ((9Z)-β-Carotene) -> CA01091 ((9Z)-10'-Apo-β-carotenal) -> CA01157 (Carlactone) -> CA01152 (Strigol) -> CA01153 (Strigyl acetate)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000079 (Knwon path in Arabidopsis sp.: CA00309 -> CA00311), CB000079 (Knwon path in Arabidopsis sp.: CA00311 -> CA01091), CB000079 (Knwon path in Arabidopsis sp.: CA01091 -> CA01157), CB000085 (Knwon path in general: CA01157 -> CA01152), Proposed reaction (CA01152 -> CA01153)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> DWARF27 (CR00357: CA00309 -> CA00311) --> CCD7 (MAX3, D17/HDT1, RMSS, DAD3) (CR00421: CA00311 -> CA01091) --> CCD8, MAX4, NCED8 (CR00109: CA01091 -> CA01157) --> unknown (CR00110: CA01157 -> CA01152) --> unknown (CA01152 -> CA01153)




  ☀ CA01155 (Orobanchol) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00311 ((9Z)-β-Carotene) -> CA01091 ((9Z)-10'-Apo-β-carotenal) -> CA01157 (Carlactone) -> CA01151 (5-Deoxystrigol) -> CA01155 (Orobanchol)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000079 (Knwon path in Arabidopsis sp.: CA00309 -> CA00311), CB000079 (Knwon path in Arabidopsis sp.: CA00311 -> CA01091), CB000079 (Knwon path in Arabidopsis sp.: CA01091 -> CA01157), CB000129 (Knwon path in parasitic plants: CA01157 -> CA01151), Proposed reaction (CA01151 -> CA01155)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> DWARF27 (CR00357: CA00309 -> CA00311) --> CCD7 (MAX3, D17/HDT1, RMSS, DAD3) (CR00421: CA00311 -> CA01091) --> CCD8, MAX4, NCED8 (CR00109: CA01091 -> CA01157) --> P450? (CR00426: CA01157 -> CA01151) --> unknown (CA01151 -> CA01155)




  ☀ CA01156 (Sorgomol) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00311 ((9Z)-β-Carotene) -> CA01091 ((9Z)-10'-Apo-β-carotenal) -> CA01157 (Carlactone) -> CA01151 (5-Deoxystrigol) -> CA01156 (Sorgomol)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000079 (Knwon path in Arabidopsis sp.: CA00309 -> CA00311), CB000079 (Knwon path in Arabidopsis sp.: CA00311 -> CA01091), CB000079 (Knwon path in Arabidopsis sp.: CA01091 -> CA01157), CB000129 (Knwon path in parasitic plants: CA01157 -> CA01151), Proposed reaction (CA01151 -> CA01156)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> DWARF27 (CR00357: CA00309 -> CA00311) --> CCD7 (MAX3, D17/HDT1, RMSS, DAD3) (CR00421: CA00311 -> CA01091) --> CCD8, MAX4, NCED8 (CR00109: CA01091 -> CA01157) --> P450? (CR00426: CA01157 -> CA01151) --> unknown (CA01151 -> CA01156)




  ☀ CA00862 (Blumenol C) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00298 (δ-Carotene) -> CA00864 (α-Ionone) -> CA00862 (Blumenol C)

   See: CB000010 (Knwon path in general: CA00043 -> CA00298), CR00095 (CA00298 -> CA00864), Proposed reaction (CA00864 -> CA00862)

   Necessary enzymes for those reactions in theory: CrtL-e(5.5.1.18), LCYe(5.5.1.18) (CR00377: CA00043 -> CA00298) --> unknown (CR00095: CA00298 -> CA00864) --> unknown (CA00864 -> CA00862)




  ☀ CA01154 (Sorgolactone) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00311 ((9Z)-β-Carotene) -> CA01091 ((9Z)-10'-Apo-β-carotenal) -> CA01157 (Carlactone) -> CA01151 (5-Deoxystrigol) -> CA01154 (Sorgolactone)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000079 (Knwon path in Arabidopsis sp.: CA00309 -> CA00311), CB000079 (Knwon path in Arabidopsis sp.: CA00311 -> CA01091), CB000079 (Knwon path in Arabidopsis sp.: CA01091 -> CA01157), CB000129 (Knwon path in parasitic plants: CA01157 -> CA01151), Proposed reaction (CA01151 -> CA01154)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> DWARF27 (CR00357: CA00309 -> CA00311) --> CCD7 (MAX3, D17/HDT1, RMSS, DAD3) (CR00421: CA00311 -> CA01091) --> CCD8, MAX4, NCED8 (CR00109: CA01091 -> CA01157) --> P450? (CR00426: CA01157 -> CA01151) --> unknown (CA01151 -> CA01154)




  ☀ CA00863 (Blumenol C cellobioside) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00298 (δ-Carotene) -> CA00864 (α-Ionone) -> CA01138 (Cyclohexenone) -> CA00863 (Blumenol C cellobioside)

   See: CB000010 (Knwon path in general: CA00043 -> CA00298), CR00095 (CA00298 -> CA00864), CR00319 (CA00864 -> CA01138), Proposed reaction (CA01138 -> CA00863)

   Necessary enzymes for those reactions in theory: CrtL-e(5.5.1.18), LCYe(5.5.1.18) (CR00377: CA00043 -> CA00298) --> unknown (CR00095: CA00298 -> CA00864) --> unknown (CR00319: CA00864 -> CA01138) --> unknown (CA01138 -> CA00863)




  ☀ CA00884 (Mycorradicin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA01133 (C14 aldehyde) -> CA00884 (Mycorradicin)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CR00041 (CA00309 -> CA01133), CR00212 (CA01133 -> CA00884)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> AtCCD1, CCD1 (CR00041: CA00309 -> CA01133) --> unknown (CR00416: CA01133 -> CA00884)




Ref.690 : Enfissi EM, Nogueira M, Bramley PM, Fraser PD, Plant J. 2017 Feb;89(4):774-788. doi: 10.1111/tpj.13428. Epub 2017 Feb 7., "The regulation of carotenoid formation in tomato fruit.", PMID: 27865019 DOI: 10.1111/tpj.13428

Since June 15th, 2015 by Junko Yabuzaki.