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CarotenoidsDB:
Gardenia Jasminoides
carotenoids (Eukaryote) reconstructed pathways in theory
(Land plant: gardenia)
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Click here to see the carotenoid profile of Gardenia Jasminoides
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Pathway reconstructed carotenoids:
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CA00898 (Crocin)
CA00903 (Crocin 2)
CA00901 (Crocin 3)
CA00902 (Crocin 4)
CA00896 (Crocin 5)
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Pathway unconstructed carotenoids:
None
☀
Lycopene biosynthesis type:
Plant type (Ref.690)
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CA00043 (Lycopene)
biosynthesis pathway
Path:
CA00189
(Prephytoene pyrophosphate (diphosphate))
->
CA00060
(Phytoene)
->
CA00059
((9Z,15Z)-Phytofluene)
->
CA00053
((9Z,15Z,9'Z)-ζ-Carotene)
->
CA00065
((9Z,9'Z)-ζ-Carotene)
->
CA00066
((7Z,9Z,9'Z)-Neurosporene)
->
CA00044
(Prolycopene)
->
CA00043
(Lycopene)
See:
CB000004
(Cyanobacterial and higher plant pathay: CA00189 -> CA00060 -> CA00059 -> CA00053 -> CA00065 -> CA00066 -> CA00044 -> CA00043)
Necessary enzymes for those reactions in theory:
CrtB(2.5.1.32), CitPsy(2.5.1.32), AtPSY(2.5.1.32) (
CR00277
: CA00189 -> CA00060) --> PDS(1.3.5.5) (
CR00015
: CA00060 -> CA00059) --> PDS(1.3.5.5) (
CR00016
: CA00059 -> CA00053) --> Z-ISO(5.2.1.12) (
CR00390
: CA00053 -> CA00065) --> CrtI(1.3.5.6), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (
CR00011
: CA00065 -> CA00066) --> CrtI(1.3.5.6), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (
CR00012
: CA00066 -> CA00044) --> CRTISO(5.2.1.13) (
CR00391
: CA00044 -> CA00043)
☀
CA00898 (Crocin)
biosynthesis pathway
Path:
CA00309
(β-Carotene)
->
CA00322
(β-Cryptoxanthin)
->
CA00328
(Zeaxanthin)
->
CA00886
(Crocetindial)
->
CA00889
(Crocetin)
->
CA00896
(Crocin 5)
->
CA00901
(Crocin 3)
->
CA00903
(Crocin 2)
->
CA00898
(Crocin)
See:
CB000082
(Knwon path in land plants: CA00309 -> CA00322 -> CA00328 -> CA00886 -> CA00889 -> CA00896 -> CA00901 -> CA00903 -> CA00898)
Necessary enzymes for those reactions in theory:
CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (
CR00192
: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (
CR00190
: CA00322 -> CA00328) --> ZCD, CCD2 (
CR00056
: CA00328 -> CA00886) --> unknown (
CR00213
: CA00886 -> CA00889) --> unknown (
CR00296
: CA00889 -> CA00896) --> unknown (
CR00308
: CA00896 -> CA00901) --> UGTCs2; UGT75L6 (
CR00311
: CA00901 -> CA00903) --> UGT94E5 (
CR00309
: CA00903 -> CA00898)
☀
CA00902 (Crocin 4)
biosynthesis pathway
Path:
CA00309
(β-Carotene)
->
CA00322
(β-Cryptoxanthin)
->
CA00328
(Zeaxanthin)
->
CA00886
(Crocetindial)
->
CA00889
(Crocetin)
->
CA00902
(Crocin 4)
See:
CB000083
(Knwon path in land plants: CA00309 -> CA00322 -> CA00328 -> CA00886 -> CA00889 -> CA00902)
Necessary enzymes for those reactions in theory:
CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (
CR00192
: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (
CR00190
: CA00322 -> CA00328) --> ZCD, CCD2 (
CR00056
: CA00328 -> CA00886) --> unknown (
CR00213
: CA00886 -> CA00889) --> unknown (CA00889 -> CA00902)
Ref.690 : Enfissi EM, Nogueira M, Bramley PM, Fraser PD, Plant J. 2017 Feb;89(4):774-788. doi: 10.1111/tpj.13428. Epub 2017 Feb 7., "The regulation of carotenoid formation in tomato fruit.", PMID: 27865019 DOI: 10.1111/tpj.13428
Since June 15th, 2015 by Junko Yabuzaki.
