Carotenoids obi
All carotenoids     All organisms     All pathways     All reactions     Feedback CarotenoidsDB: Erythrobacter longus carotenoids (Bacterial) reconstructed pathways in theory
                            (Alphaproteobacteria: marine anoxygenic phototroph with BChl a)
                                 ☀ Click here to see the carotenoid profile of Erythrobacter longus
welcome
  [   About  |   Help  |   Search carotenoid entry  |   Search organism entry  |   Search similar carotenoids  |   Predict biological activities of a carotenoid  |   Search similar profiled organisms   ]
☀ Pathway reconstructed carotenoids:       [  Search similar carotenogenesis pathway constructing organisms  ]  
  1. CA00124 (Anhydrorhodovibrin)
  2. CA00096 (Spirilloxanthin)
  3. CA00198 (Rubixanthin)
  4. CA00218 (Bacteriorubixanthin)
  5. CA00253 (Bacteriorubixanthinal)
  6. CA00322 (β-Cryptoxanthin)
  7. CA00338 (Caloxanthin)
  8. CA00346 (Nostoxanthin)
  9. CA00359 (Caloxanthin 3-sulphate)
  10. CA00521 (Erythroxanthin sulphate)
  11. CA00998 ((3R)-3-Hydroxy-β-ionone)
☀ Pathway unconstructed carotenoids: None
☀ Lycopene biosynthesis type: Bacterial type (Ref.690)

  ☀ CA00043 (Lycopene) biosynthesis pathway

   Path: CA00189 (Prephytoene pyrophosphate (diphosphate)) -> CA00060 (Phytoene) -> CA00058 ((all-E)-Phytofluene) -> CA00051 (ζ-Carotene) -> CA00047 (Neurosporene) -> CA00043 (Lycopene)

   See: CB000005 (Bacterial and fungal pathway: CA00189 -> CA00060 -> CA00058 -> CA00051 -> CA00047 -> CA00043)

   Necessary enzymes for those reactions in theory: CrtB(2.5.1.32), CitPsy(2.5.1.32), AtPSY(2.5.1.32) (CR00277: CA00189 -> CA00060) --> Crtlb(1.3.99.28), CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.99.29), Crtla(1.3.99.29) (CR00389: CA00060 -> CA00058) --> CrtI(1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), PDS(1.3.5.5, 1.3.99.29), Crtla(1.3.99.29) (CR00115: CA00058 -> CA00051) --> PDS(1.3.5.5, 1.3.99.29), CitPDS1(1.3.5.5), BoPDS(1.3.5.5), CrtI(1.3.5.6, 1.3.99.28, 1.3.99.30, 1.3.99.31), Crtlb(1.3.99.28), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00136: CA00051 -> CA00047) --> CrtI(1.3.5.6, 1.3.99.30, 1.3.99.31), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6), Crtlb(1.3.99.26) (CR00132: CA00047 -> CA00043)




  ☀ CA00096 (Spirilloxanthin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00073 (Rhodopin) -> CA00070 (3,4-Dehydrorhodopin) -> CA00124 (Anhydrorhodovibrin) -> CA00091 (Rhodovibrin) -> CA00090 (Monodemethyl spirilloxanthin) -> CA00096 (Spirilloxanthin)

   See: CB000047 (Knwon path in purple bacterium: CA00043 -> CA00073 -> CA00070 -> CA00124 -> CA00091 -> CA00090 -> CA00096)

   Necessary enzymes for those reactions in theory: CrtC (CR00229: CA00043 -> CA00073) --> CrtD (CR00120: CA00073 -> CA00070) --> CrtF (CR00326: CA00070 -> CA00124) --> CrtC (CR00352: CA00124 -> CA00091) --> CrtD (CR00121: CA00091 -> CA00090) --> CrtF (CR00327: CA00090 -> CA00096)




  ☀ CA00198 (Rubixanthin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00198 (Rubixanthin)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), similar to CB000051: CA01058 -> CA00961 (proposed reaction: CA00191 -> CA00198)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> unknown (CA00191 -> CA00198)




  ☀ CA00218 (Bacteriorubixanthin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00202 (1'-Hydroxy-γ-carotene) -> CA00217 (1'-Hydroxytorulene) -> CA00200 (1'-Methoxy-3',4'-dehydro-γ-carotene) -> CA00218 (Bacteriorubixanthin)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000024 (Knwon path in purple bacterium: CA00191 -> CA00202), CB000024 (Knwon path in purple bacterium: CA00202 -> CA00217), Proposed reaction (CA00217 -> CA00200), Proposed reaction (CA00200 -> CA00218)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtC (CR00344: CA00191 -> CA00202) --> unknown (CR00113: CA00202 -> CA00217) --> unknown (CA00217 -> CA00200) --> unknown (CA00200 -> CA00218)




  ☀ CA00253 (Bacteriorubixanthinal) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00202 (1'-Hydroxy-γ-carotene) -> CA00217 (1'-Hydroxytorulene) -> CA00200 (1'-Methoxy-3',4'-dehydro-γ-carotene) -> CA00218 (Bacteriorubixanthin) -> CA00253 (Bacteriorubixanthinal)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000024 (Knwon path in purple bacterium: CA00191 -> CA00202), CB000024 (Knwon path in purple bacterium: CA00202 -> CA00217), Proposed reaction (CA00217 -> CA00200), Proposed reaction (CA00200 -> CA00218), Proposed reaction (CA00218 -> CA00253)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtC (CR00344: CA00191 -> CA00202) --> unknown (CR00113: CA00202 -> CA00217) --> unknown (CA00217 -> CA00200) --> unknown (CA00200 -> CA00218) --> unknown (CA00218 -> CA00253)




  ☀ CA00346 (Nostoxanthin) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00338 (Caloxanthin) -> CA00346 (Nostoxanthin)

   See: CB000030 (Knwon path in bacterium: CA00043 -> CA00191 -> CA00309 -> CA00322 -> CA00328 -> CA00338 -> CA00346)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> CrtG (CR00182: CA00328 -> CA00338) --> CrtG (CR00181: CA00338 -> CA00346)




  ☀ CA00359 (Caloxanthin 3-sulphate) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00338 (Caloxanthin) -> CA00359 (Caloxanthin 3-sulphate)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000030 (Knwon path in bacterium: CA00328 -> CA00338), Proposed reaction (CA00338 -> CA00359)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> CrtG (CR00182: CA00328 -> CA00338) --> unknown (CA00338 -> CA00359)




  ☀ CA00521 (Erythroxanthin sulphate) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00338 (Caloxanthin) -> CA00346 (Nostoxanthin) -> CA00359 (Caloxanthin 3-sulphate) -> CA00521 (Erythroxanthin sulphate)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000030 (Knwon path in bacterium: CA00328 -> CA00338), CB000030 (Knwon path in bacterium: CA00338 -> CA00346), (CA00346 -> CA00359), similar to CB000055: CA00309 -> CA00462 (proposed reaction: CA00359 -> CA00521)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> CrtG (CR00182: CA00328 -> CA00338) --> CrtG (CR00181: CA00338 -> CA00346) --> unknown (CA00346 -> CA00359) --> unknown (CA00359 -> CA00521)




  ☀ CA00998 ((3R)-3-Hydroxy-β-ionone) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00998 ((3R)-3-Hydroxy-β-ionone)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CR00085 (CA00328 -> CA00998)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> RdCCD1, AtCCD1 (CR00085: CA00328 -> CA00998)



Ref.690 : Enfissi EM, Nogueira M, Bramley PM, Fraser PD, Plant J. 2017 Feb;89(4):774-788. doi: 10.1111/tpj.13428. Epub 2017 Feb 7., "The regulation of carotenoid formation in tomato fruit.", PMID: 27865019 DOI: 10.1111/tpj.13428
Since June 15th, 2015 by Junko Yabuzaki.