Carotenoids obi
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                            (Land plant: white goosefoot, lamb's-quarters)
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☀ Pathway reconstructed carotenoids:       [  Search similar carotenogenesis pathway constructing organisms  ]  
  1. CA01018 (Annuionone G)
  2. CA01012 (Grasshopper ketone)
  3. CA01118 ((3S,5R,6R,8S)-9-Apo-6,7-didehydro-5,6-dihydro-3,5-dihydroxy-beta-carotene)
  4. CA00998 ((3R)-3-Hydroxy-β-ionone)
  5. CA00869 (3-Hydroxy-13-apo-α-caroten-13-one)
  6. CA00870 ((6S,7E,9E,11E)-3-Oxo-13-apo-α-caroten-13-one)
  7. CA01059 (Abscisic alchol)
  8. CA01120 (4-Megastigmen-3,9-dione)
  9. CA01121 (3,6,9-Trihydroxy-4-megastigmene)
  10. CA01119 (3,9-Dihydroxy-4-megastigmene)
  11. CA01116 ((6R,7E)-4,7-megastigmadien-3,9-dione )
  12. CA01113 ((3R,6R,7E)-3-Hydroxy-4,7-megastigmadien-9-one)
  13. CA01114 ((6R,7E,9R)-9-Hydroxy-4,7-megastigmadien-3-one)
  14. CA01115 ((3R,6R,7E,9R)-3,9-dihydroxy-4,7-megastigmadiene)
☀ Pathway unconstructed carotenoids: CA01118 ((3S,5R,6R,8S)-9-Apo-6,7-didehydro-5,6-dihydro-3,5-dihydroxy-beta-carotene), CA01120 (4-Megastigmen-3,9-dione), CA01121 (3,6,9-Trihydroxy-4-megastigmene), CA01119 (3,9-Dihydroxy-4-megastigmene), CA01116 ((6R,7E)-4,7-megastigmadien-3,9-dione ), CA01113 ((3R,6R,7E)-3-Hydroxy-4,7-megastigmadien-9-one), CA01114 ((6R,7E,9R)-9-Hydroxy-4,7-megastigmadien-3-one), CA01115 ((3R,6R,7E,9R)-3,9-dihydroxy-4,7-megastigmadiene)
☀ Lycopene biosynthesis type: Plant type (Ref.690)

  ☀ CA00043 (Lycopene) biosynthesis pathway

   Path: CA00189 (Prephytoene pyrophosphate (diphosphate)) -> CA00060 (Phytoene) -> CA00059 ((9Z,15Z)-Phytofluene) -> CA00053 ((9Z,15Z,9'Z)-ζ-Carotene) -> CA00065 ((9Z,9'Z)-ζ-Carotene) -> CA00066 ((7Z,9Z,9'Z)-Neurosporene) -> CA00044 (Prolycopene) -> CA00043 (Lycopene)

   See: CB000004 (Cyanobacterial and higher plant pathay: CA00189 -> CA00060 -> CA00059 -> CA00053 -> CA00065 -> CA00066 -> CA00044 -> CA00043)

   Necessary enzymes for those reactions in theory: CrtB(2.5.1.32), CitPsy(2.5.1.32), AtPSY(2.5.1.32) (CR00277: CA00189 -> CA00060) --> PDS(1.3.5.5) (CR00015: CA00060 -> CA00059) --> PDS(1.3.5.5) (CR00016: CA00059 -> CA00053) --> Z-ISO(5.2.1.12) (CR00390: CA00053 -> CA00065) --> CrtI(1.3.5.6), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00011: CA00065 -> CA00066) --> CrtI(1.3.5.6), CrtQa(1.3.5.6), CrtQb(1.3.5.6), ZDS(1.3.5.6) (CR00012: CA00066 -> CA00044) --> CRTISO(5.2.1.13) (CR00391: CA00044 -> CA00043)




  ☀ CA01018 (Annuionone G) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00407 (Antheraxanthin) -> CA00416 (Violaxanthin) -> CA00414 (Neoxanthin) -> CA01012 (Grasshopper ketone) -> CA01018 (Annuionone G)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00328 -> CA00407), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00407 -> CA00416), CB000040 (Knwon path in general: CA00416 -> CA00414), CB000124 (Knwon path in wine and tea: CA00414 -> CA01012), CB000124 (Knwon path in wine and tea: CA01012 -> CA01018)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> ZEP(1.14.13.90) (CR00158: CA00328 -> CA00407) --> ZEP(1.14.13.90) (CR00159: CA00407 -> CA00416) --> ABA4(5.3.99.9), NSY(5.3.99.9), NXS(5.3.99.9) (CR00382: CA00416 -> CA00414) --> RdCCD1 (CR00088: CA00414 -> CA01012) --> unknown (CA01012 -> CA01018)




  ☀ CA01012 (Grasshopper ketone) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00407 (Antheraxanthin) -> CA00416 (Violaxanthin) -> CA00414 (Neoxanthin) -> CA01012 (Grasshopper ketone)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00328 -> CA00407), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00407 -> CA00416), CB000040 (Knwon path in general: CA00416 -> CA00414), CB000124 (Knwon path in wine and tea: CA00414 -> CA01012)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> ZEP(1.14.13.90) (CR00158: CA00328 -> CA00407) --> ZEP(1.14.13.90) (CR00159: CA00407 -> CA00416) --> ABA4(5.3.99.9), NSY(5.3.99.9), NXS(5.3.99.9) (CR00382: CA00416 -> CA00414) --> RdCCD1 (CR00088: CA00414 -> CA01012)




  ☀ CA00998 ((3R)-3-Hydroxy-β-ionone) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00998 ((3R)-3-Hydroxy-β-ionone)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CR00085 (CA00328 -> CA00998)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> RdCCD1, AtCCD1 (CR00085: CA00328 -> CA00998)




  ☀ CA00869 (3-Hydroxy-13-apo-α-caroten-13-one) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00298 (δ-Carotene) -> CA00587 (α-Carotene) -> CA00592 (Zeinoxanthin) -> CA00597 (Lutein) -> CA00869 (3-Hydroxy-13-apo-α-caroten-13-one)

   See: CB000010 (Knwon path in general: CA00043 -> CA00298), CB000033 (Knwon path in general: CA00298 -> CA00587), CB000033 (Knwon path in general: CA00587 -> CA00592), CB000033 (Knwon path in general: CA00592 -> CA00597), Proposed reaction (CA00597 -> CA00869)

   Necessary enzymes for those reactions in theory: CrtL-e(5.5.1.18), LCYe(5.5.1.18) (CR00377: CA00043 -> CA00298) --> LCYb, CrtL(5.5.1.19), CrtL-b(5.5.1.19), CrtL-e(5.5.1.19) (CR00367: CA00298 -> CA00587) --> LUT5/CYP97A3, CrtR-b (CR00199: CA00587 -> CA00592) --> LUT1/CYP97C1 (CR00197: CA00592 -> CA00597) --> unknown (CA00597 -> CA00869)




  ☀ CA00870 ((6S,7E,9E,11E)-3-Oxo-13-apo-α-caroten-13-one) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00298 (δ-Carotene) -> CA00587 (α-Carotene) -> CA00592 (Zeinoxanthin) -> CA00597 (Lutein) -> CA00869 (3-Hydroxy-13-apo-α-caroten-13-one) -> CA00870 ((6S,7E,9E,11E)-3-Oxo-13-apo-α-caroten-13-one)

   See: CB000010 (Knwon path in general: CA00043 -> CA00298), CB000033 (Knwon path in general: CA00298 -> CA00587), CB000033 (Knwon path in general: CA00587 -> CA00592), CB000033 (Knwon path in general: CA00592 -> CA00597), Proposed reaction (CA00597 -> CA00869), Proposed reaction (CA00869 -> CA00870)

   Necessary enzymes for those reactions in theory: CrtL-e(5.5.1.18), LCYe(5.5.1.18) (CR00377: CA00043 -> CA00298) --> LCYb, CrtL(5.5.1.19), CrtL-b(5.5.1.19), CrtL-e(5.5.1.19) (CR00367: CA00298 -> CA00587) --> LUT5/CYP97A3, CrtR-b (CR00199: CA00587 -> CA00592) --> LUT1/CYP97C1 (CR00197: CA00592 -> CA00597) --> unknown (CA00597 -> CA00869) --> unknown (CA00869 -> CA00870)




  ☀ CA01059 (Abscisic alchol) biosynthesis pathway

   Path: CA00043 (Lycopene) -> CA00191 (γ-Carotene) -> CA00309 (β-Carotene) -> CA00322 (β-Cryptoxanthin) -> CA00328 (Zeaxanthin) -> CA00407 (Antheraxanthin) -> CA00416 (Violaxanthin) -> CA00414 (Neoxanthin) -> CA00422 ((9'Z)-Neoxanthin) -> CA00867 (Xanthoxin) -> CA00866 (Abscisic aldehyde) -> CA01059 (Abscisic alchol)

   See: CB000007 (Knwon path in general: CA00043 -> CA00191), CB000009 (Knwon path in general: CA00191 -> CA00309), CB000028 (Knwon path in general: CA00309 -> CA00322), CB000028 (Knwon path in general: CA00322 -> CA00328), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00328 -> CA00407), CB000038 (Algal and higher plant pathway (probably eukaryotic): CA00407 -> CA00416), CB000040 (Knwon path in general: CA00416 -> CA00414), CB000040 (Knwon path in general: CA00414 -> CA00422), CB000080 (Knwon path in general: CA00422 -> CA00867), CB000080 (Knwon path in general: CA00867 -> CA00866), CR00260 (CA00866 -> CA01059)

   Necessary enzymes for those reactions in theory: CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P(5.5.1.19), AL2(5.5.1.19) (CR00374: CA00043 -> CA00191) --> CrtL(5.5.1.19), CrtY(5.5.1.19), CrtL-b(5.5.1.19), CruA/P, AL2, PSY(2.5.1.32) (CR00365: CA00191 -> CA00309) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00192: CA00309 -> CA00322) --> CrtR(1.14.13.129), CrtZ(1.14.13.129), LUT5(1.14.13.129), BCH(1.14.13.129) (CR00190: CA00322 -> CA00328) --> ZEP(1.14.13.90) (CR00158: CA00328 -> CA00407) --> ZEP(1.14.13.90) (CR00159: CA00407 -> CA00416) --> ABA4(5.3.99.9), NSY(5.3.99.9), NXS(5.3.99.9) (CR00382: CA00416 -> CA00414) --> unknown (CR00359: CA00414 -> CA00422) --> CCD(1.13.11.51), NCED(1.13.11.51) (CR00044: CA00422 -> CA00867) --> ABA2 (CR00172: CA00867 -> CA00866) --> unknown (CR00260: CA00866 -> CA01059)



Ref.690 : Enfissi EM, Nogueira M, Bramley PM, Fraser PD, Plant J. 2017 Feb;89(4):774-788. doi: 10.1111/tpj.13428. Epub 2017 Feb 7., "The regulation of carotenoid formation in tomato fruit.", PMID: 27865019 DOI: 10.1111/tpj.13428
Since June 15th, 2015 by Junko Yabuzaki.